MAPHIS - Measuring arthropod phenotypes using hierarchical image segmentations

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This publication doesn't include Faculty of Arts. It includes Faculty of Informatics. Official publication website can be found on muni.cz.

Authors	MRÁZ Radoslav ŠTĚPKA Karel PEKÁR Matěj MATULA Petr PEKÁR Stanislav
Year of publication	2023
MU Faculty or unit	Faculty of Informatics
web	Software repository https://maphis.fi.muni.cz/
Description	MAPHIS is an open-source application allowing users to create hierarchichal segmentations of arthropods, extract various measurements from the generated segmentations and finally export the measurements for further analysis. The application features an automatic segmentation method (with the use of a convolutional neural network) and several interactive tools. Furthermore, through its plugin system users can extend or customize the capabilities of the application.
Related projects:	Mimetic complexes and the evolution of inaccurate mimics Czech BioImaging: National research infrastructure for biological and medical imaging