Acquiarium version 1.6

Warning

This publication doesn't include Faculty of Arts. It includes Faculty of Informatics. Official publication website can be found on muni.cz.

Authors	MATULA Pavel DANĚK Ondřej MAŠKA Martin VINKLER Marek
Year of publication	2008
MU Faculty or unit	Faculty of Informatics
Web	http://cbia.fi.muni.cz/acquiarium.html
Description	Acquiarium 1.6 is free software for solving the common pipeline of many spatial cell studies using fluorescence microscopy. It addresses image capture, raw image correction, image segmentation, quantification of segmented objects and their spatial arrangement, volume rendering, and statistical evaluation. The software is designed for processing of a collection of many 3D images. It can be used for analysis of a collection of 2D images or time lapse series of 2D or 3D images as well. It has a modular design and is extensible via plug-ins.
Related projects:	Determination of markers, screening and early diagnostics of cancer diseases using highly automated processing of multidimensional biomedical images