eBCSgen: A Software Tool for Biochemical Space Language

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Authors	TROJÁK Matej ŠAFRÁNEK David MERTOVÁ Lukrécia BRIM Luboš
Year of publication	2020
Type	Article in Proceedings
Conference	18th International Conference on Computational Methods in Systems Biology, CMSB 2020
MU Faculty or unit	Faculty of Informatics
Citation
web	https://doi.org/10.1007/978-3-030-60327-4_20
Doi	http://dx.doi.org/10.1007/978-3-030-60327-4_20
Keywords	rule-based modelling; parameter synthesis; static analysis; Galaxy tool
Description	eBCSgen is a tool for development and analysis of models written in Biochemical Space Language (BCSL). BCSL is a rule-based language for biological systems designed to combine compact description with a specific level of abstraction which makes it accessible to users from life sciences. Currently, eBCSgen represents the only tool completely supporting BCSL. It has the form of a command line interface which is integrated into Galaxy – a web-based bioinformatics platform automating data-driven and model-based analysis pipelines
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